I have also experienced this inconsistent boost, felt it and noticed on boost display gauge.
*it could be fuel related as here in Australia two reputable Toyota GR dealers mentioned the GR being very fussy about fuel quality and have recommended BP 98 only, mind you i only use this fuel and hasn't solved the problem.
*In my case, i don't believe it is traction related as i have experienced different levels of boost on completely dry roads on a warm day with warm tyres, can't be traction with AWD and sticky pilot sport 4S tyres.
*Tried disconnecting battery for 20 mins, made no difference.
*Tried full throttle bursts, help sometimes but not repeatable or consistent.
Interestingly i have owned two GR Yaris's for over 2 years and one of them always feels quick with strong boost, the other one feels as quick about 30-40% of the time, other times it feels noticeably slower and almost like a NA engine. I can take either car out on the same day, so same weather, same roads, same fuel etc one always feel quick the other only sometimes. ???
I believe it must be something the ECU is doing, they seem to be very fussy and might be limiting boost timing etc God knows why?
PS. both cars a completely stock.