My other car, Volvo V40, is occasionally displaying a Low Battery warning. Reading up on it, several sources said do not connect anything directly to the negative battery terminal, either a charger or accessories (lights, amplifier, radio, etc).
The Battery Current and Temperature sensor will not see the current if it is connected to the battery terminal, IE, before the sensor.
I'm not sure about the Toyota, but the Volvo monitors the current 24/7, so it needs to see any charge going into the battery from a booster or trickle charger to give an accurate status report.
More importantly for vehicles with a smart alternator, if it can't sense accessories there is a possibility it could overcharge the battery and/or damage the alternator.
The picture below shows my Noco charger lead correctly grounded with the Current Sensor between the battery and charger.
Any other suitable ground point on the body or the engine, such as the one near the strut tower, will also work and allow the sensor to see the total current.
Something to remember when charging or fitting accessories to a modern vehicle.